Nic-systems: Created page with "'''neuronic.nic.uoregon.edu''' Note: Neuronic is long gone. This page is kept for reference only. == Basics == * 2U Dell PowerEdge 2650 * 34 i686 Xeon Processors: ** Fronten..."

2020-02-04T01:59:20Z

Created page with "'''neuronic.nic.uoregon.edu''' Note: Neuronic is long gone. This page is kept for reference only. == Basics == * 2U Dell PowerEdge 2650 * 34 i686 Xeon Processors: ** Fronten..."

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'''neuronic.nic.uoregon.edu'''

Note: Neuronic is long gone. This page is kept for reference only.

== Basics ==
* 2U Dell PowerEdge 2650
* 34 i686 Xeon Processors:
** Frontend: 2 Single-Core Xeon (Prestonia) @2.8Ghz
** Nodes 0-15: 2 Single-Core Xeon (Prestonia) @2.8Ghz
* 68 Gb of RAM:
** Frontend: 4Gb
** Nodes 0-15: 4Gb
* SCSI Disks:
** Frontend: PERC 3Di RAID; 36Gb mirror + 73Gb mirror
** Nodes 0-15: 36Gb
* Myricom Myrinet-2000 Cluster Interconnect (M3S-PCI64C 2MB)
* 2 onboard Broadcom Tigon3 copper NICs
* Dell [[Compute:Neuronic/RAC|Embedded Remote Access Controller III]] for remote management
* Rocks Cluster Linux 5.0 (CentOS 5.2 + perfctr kernel)
* All nodes in one full-height Dell rack

== Detailed Configuration Info ==
Consult the [[Compute:Neuronic/Configuration|Configuration]] subpage.

== Load Monitoring ==
You may check the cluster utilization and job queue with [https://mist.cs.uoregon.edu/ganglia/ Ganglia on Mist].

== MPI and Torque+Maui ==

=== Getting Started ===
See '''[[Software:PBS]]''' for general information on using our Torque+Maui batch scheduling system for interactive or parallel jobs. Included are instructions on how to compile your code, write a batch job, and submit it for processing.

=== Queues ===
Jobs submitted from the Mist frontend will enter into the 'neuronic' queue by default. This contains all 16 nodes. See [[Software:PBS#Queues|Queues]] for a list of available queues.

=== Myrinet High-Speed Cluster Interconnect ===
All Neuronic compute nodes are equipped with Myrinet cards that give double the throughput and less than 1/4 the latency of Gigabit Ethernet. Any MPI-enabled programs built using the scheduler-enabled MPIs will automatically use these interconnects.

=== Node Attributes ===
The Neuronic nodes are all identically configured. Unlike [[Compute:Mist|Mist]], there are no special attributes available on a subset of the nodes. See [[Software:PBS#Batch_attributes|Batch Attributes]] for more information about using qsub arguments or job script lines to fine-tune your run parameters.

[[Category:Compute]]

Neuronic - Revision history

Nic-systems: Created page with "'''neuronic.nic.uoregon.edu''' Note: Neuronic is long gone. This page is kept for reference only. == Basics == * 2U Dell PowerEdge 2650 * 34 i686 Xeon Processors: ** Fronten..."